Software

Infectious Disease Modelling

denim
Construct and simulate deterministic discrete-time compartmental models with customisable dwell time distributions
Authors: T Ong, TQA Phan, ML Ha, M Choisy
R C++ CRAN
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serosv
Analyse serological data and estimate infectious diseases parameters
Authors: TQA Phan, NTN Pham, TL Bui, NT Huynh, M Choisy, T Ong
R
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Biostatistics

hss
Estimate sample size for health study designs
Authors: QL Khuong, T Ong, VM Hoang
R
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Bioinformatics

Lifted
Enhance genome conversion robustness during reference assembly updates
Authors: PL Luu, T Ong, TP Dinh, SJ Clark
R bash Paper
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MethPanel
Analyse multiplex bisulphite PCR sequencing to assess DNA methylation biomarker panels for disease detection
Authors: PL Luu, T Ong, TTH Loc, D Lam, R Pidsley, C Stirzaker, SJ Clark
R bash Paper
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